| Lithuania II Lyga | 2024/06/12 16:30 | FM FORTUNA Kaunas v FK Neptunas Klaipeda II | D | 2-2 |
| Lithuania II Lyga | 2024/09/22 10:00 | FK Saned v FK Neptunas Klaipeda II | W | 1-4 |
| Lithuania II Lyga | 2024/09/15 10:00 | FK Neptunas Klaipeda II v FK Dainava Alytus II | W | 5-0 |
| Lithuania II Lyga | 2024/09/08 11:00 | FK Viltis Vilnius v FK Neptunas Klaipeda II | L | 6-1 |
| Lithuania II Lyga | 2024/09/02 17:00 | FK Neptunas Klaipeda II v FK Dziugas Telsiai II | W | 4-0 |
| Lithuania II Lyga | 2024/08/25 10:00 | FK Neptunas Klaipeda II v FK Transinvest II | L | 0-6 |
| Lithuania II Lyga | 2024/08/16 15:30 | FK Sirvena v FK Neptunas Klaipeda II | L | 5-1 |
| Lithuania II Lyga | 2024/08/12 15:00 | FK Neptunas Klaipeda II v FK Zalgiris Vilnius II | D | 2-2 |
| Lithuania II Lyga | 2024/08/05 15:30 | Lietava Jonava v FK Neptunas Klaipeda II | L | 2-0 |
| Lithuania II Lyga | 2024/09/21 10:00 | FM FORTUNA Kaunas v FK Sirvena | W | 3-2 |
| Lithuania II Lyga | 2024/09/13 15:00 | FK Zalgiris Vilnius II v FM FORTUNA Kaunas | L | 8-1 |
| Lithuania II Lyga | 2024/09/07 12:00 | FM FORTUNA Kaunas v Lietava Jonava | L | 1-8 |
| Lithuania II Lyga | 2024/08/31 15:00 | FK Silute v FM FORTUNA Kaunas | L | 5-1 |
| Lithuania II Lyga | 2024/08/24 10:00 | FM FORTUNA Kaunas v Suduva Marijampole II | L | 2-4 |
| Lithuania II Lyga | 2024/08/16 16:00 | FM Klaipedos v FM FORTUNA Kaunas | L | 7-0 |
| Lithuania II Lyga | 2024/08/10 13:00 | FM FORTUNA Kaunas v FK Sveikata | L | 0-8 |
| Lithuania II Lyga | 2024/08/02 16:00 | FK Dembava v FM FORTUNA Kaunas | L | 4-0 |